How many unzipped fastq (.fq or .fastq) files are in the directory
1. How many unzipped fastq (.fq or .fastq) files are in the directory
/data/compres/seq_platform_data/
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2. The output of trimming software will also be a fastq file (or multiple fastq files) (True/False)
3. Which option is specified to run trimmomatic on paired-end sequence data?
PE
-PE
SE
-SE
4. What will happen if you execute the command:
fastqc -h
fastqc will run default options
fastqc will fail and print an error message because you haven’t specified a fastq file for it to run on
fastqc will output the help file and exit
5. Which of the following can be used to transfer files between a local computer and a high-performance computing cluster?
FileZilla
sftp
Cyberduck
ssh
mv
